What Are the Special Requirements for Flushing and Pressurization Before Starting a Seawater Desalination System?| Insights by AQUALITEK

Wednesday, 01/14/2026

Improper flushing and pressurization are major causes of early membrane damage in seawater RO systems. This article explains the special startup requirements and best practices to ensure safe desalination system operation.

Introduction

Compared with brackish water RO systems, seawater desalination (SWRO) systems operate at much higher pressures and face far greater fouling and scaling risks. As a result, the flushing and pressurization procedures before startup are critical and must be performed with stricter control.

Failure to follow proper startup practices can lead to:

Irreversible membrane compaction

Mechanical damage to membrane elements

Sudden fouling or scaling

High-pressure pump overload

This article outlines the special requirements and best practices for flushing and pressurization before starting a seawater desalination system.

Why Flushing and Pressurization Are More Critical in SWRO Systems

Seawater RO systems differ fundamentally from conventional RO in several ways:

Operating pressure typically reaches 55–70 bar (800–1,000 psi)

Feedwater contains high salinity, suspended solids, organics, and microorganisms

Membrane elements are more sensitive to pressure shock and fouling

Therefore, startup must focus on protecting membranes, stabilizing hydraulics, and ensuring clean operating conditions before applying full pressure.

Special Requirements for Flushing Before Startup

1. Thorough Low-Pressure Flushing Is Mandatory

Before pressurization, the system must be flushed at low pressure and low flow velocity to:

Remove preservatives from new membranes

Flush out debris, air, oil, and installation residues

Remove biological growth in idle systems

Key requirements:

No backpressure on concentrate line

Permeate valves fully open

Pressure typically below 3 bar

2. Use Qualified Water for Flushing

Flushing water quality must meet specific criteria:

SDI₁₅ ≤ system design limit

Turbidity < 1 NTU

No free chlorine or oxidants

Temperature within membrane limits

⚠️ Using raw seawater without proper pretreatment can cause instant fouling during startup.

3. Flush Without Producing Product Water Initially

During initial flushing:

Permeate should be discharged to drain

Product tanks must remain isolated

This prevents:

Contamination of storage tanks

Residual chemicals entering downstream systems

4. Extended Flushing Time for New or Idle Systems

Typical flushing duration:

30–60 minutes for normal restarts

1–2 hours or longer for new installations or long shutdowns

Flushing should continue until:

No visible air bubbles

Stable pressure readings

Conductivity trends stabilize

Special Requirements for Pressurization Before Operation

1. Pressurization Must Be Gradual and Stepwise

Sudden pressurization is one of the most common causes of membrane damage.

Best practice:

Increase pressure slowly over 5–10 minutes

Monitor differential pressure and flow continuously

Avoid pressure spikes or oscillations

This protects membranes from:

Mechanical shock

Element telescoping

Seal damage

2. Maintain Adequate Crossflow During Pressurization

During pressure ramp-up:

Concentrate flow must be sufficient

Concentrate valve should not be closed too early

This ensures:

Uniform flow distribution

Prevention of localized concentration polarization

Reduced fouling risk

3. Avoid High Recovery During Initial Pressurization

Initial startup recovery should be lower than design recovery.

Typical recommendation:

Start at 50–70% of design recovery

Gradually increase after stabilization

High recovery during startup can cause:

Rapid scaling

Uneven membrane loading

Premature fouling

4. Closely Monitor Key Parameters

Critical parameters to watch during pressurization:

Feed pressure rise rate

Differential pressure across membranes

Permeate conductivity trend

High-pressure pump current

Any abnormal trend indicates that pressurization should be slowed or stopped immediately.

Additional Best Practices for SWRO Startup

Ensure complete air removal from pressure vessels

Verify correct valve positions before startup

Confirm energy recovery device readiness

Synchronize high-pressure pump and ERD operation

Follow membrane manufacturer startup guidelines strictly

Common Startup Mistakes to Avoid

Mistake

Consequence

Skipping low-pressure flushing

Instant fouling

Rapid pressure increase

Membrane damage

High recovery at startup

Scaling risk

Flushing with untreated seawater

Biofouling

Producing permeate too early

Product contamination

Conclusion

Flushing and pressurization before starting a seawater desalination system are not routine steps but critical protective procedures. Due to high operating pressures and complex feedwater quality, SWRO systems require extended low-pressure flushing, careful air removal, and slow, controlled pressurization.

Following best practices during startup significantly extends membrane life, reduces fouling risk, and ensures long-term system stability.

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