Why Must a Seawater Desalination System Be Flushed with Low-Pressure Fresh Water Before Slowly Increasing Pressure at Startup?| Insights by AQUALITEK

Tuesday, 01/27/2026

Learn why low-pressure freshwater flushing followed by gradual pressurization is essential when starting a seawater desalination RO system, and how it protects membranes and equipment.

Introduction

Starting up a seawater reverse osmosis (SWRO) desalination system is a high-risk operational phase.
Improper startup procedures can cause irreversible membrane damage, severe fouling, and mechanical failure—sometimes within minutes.

For this reason, industry-standard operating procedures require that SWRO systems be flushed with low-pressure fresh water first, and only then slowly pressurized.

This article explains why this step is mandatory, what risks it mitigates, and how it protects both membranes and high-pressure equipment.

1. The Core Reason: Preventing Osmotic Shock to the Membrane

1.1 What Is Osmotic Shock?

Osmotic shock occurs when a membrane experiences a sudden and large osmotic pressure difference across its surface.

Seawater osmotic pressure: ≈25–30 bar

Fresh or low-salinity water: ≈0–2 bar

If high-pressure seawater is applied suddenly:

Water flux becomes highly uneven

Membrane layers experience extreme stress

Delamination and compaction may occur

Low-pressure freshwater flushing equalizes osmotic conditions before pressurization.

2. Removing Stagnant High-Salinity Brine from the System

2.1 What Happens During Shutdown?

During shutdown:

Seawater remains stagnant in membranes and pressure vessels

Salt concentration increases locally

Bioactivity may start

Oxygen and corrosion risk increase

If the system is pressurized directly:

Highly concentrated brine is instantly compressed

Local scaling and fouling accelerate

Membrane surface damage risk rises sharply

Low-pressure flushing:

Displaces stagnant seawater

Reduces salinity inside the membrane

Restores safe starting conditions

3. Preventing Instant Scaling and Fouling

3.1 Scaling Risk at Startup

At startup:

Flow is unstable

Recovery is uncontrolled

Local concentration polarization is extreme

Direct pressurization with seawater can cause:

Calcium carbonate scaling

Sulfate scaling

Immediate particulate deposition

Low-pressure freshwater flushing:

Lowers ionic strength

Keeps salts below saturation

Prevents early-stage irreversible fouling

4. Protecting the High-Pressure Pump and ERD

4.1 Mechanical Protection

Sudden pressurization can lead to:

Pressure surges

Hydraulic shock

Cavitation risk

ERD instability

Gradual pressurization allows:

Smooth hydraulic transition

Stable ERD engagement

Reduced mechanical stress on seals and bearings

5. Avoiding Membrane Compaction and Structural Damage

SWRO membranes are designed for high pressure—but not for sudden pressure spikes.

Direct startup risks:

Permanent membrane compaction

Reduced permeability

Long-term flux loss

Slow pressure ramping:

Allows membrane structure to adapt

Preserves designed water flux

Extends membrane lifespan

6. Industry-Standard Startup Logic for SWRO Systems

A typical safe startup sequence includes:

1.Low-pressure freshwater flushing

Pressure: < 3 bar

Purpose: displacement & equilibration

2.Seawater introduction at low pressure

No permeate production initially

3.Gradual pressure increase

Stepwise or ramped

Controlled concentrate valve adjustment

4.Stabilization before reaching design pressure

This sequence is recommended by all major SWRO membrane manufacturers.

7. What Happens If This Step Is Skipped?

Skipping low-pressure flushing may result in:

Immediate membrane fouling

Sudden rise in differential pressure

Rapid flux decline

Shortened membrane life

Increased cleaning frequency

Unexpected early membrane replacement

In severe cases:
👉 Membranes can be permanently damaged on the very first startup.

Conclusion

Flushing a seawater desalination system with low-pressure fresh water before slowly increasing pressure is not a precaution—it is a fundamental requirement.

In summary, this practice:

Prevents osmotic shock

Removes stagnant high-salinity seawater

Avoids instant scaling and fouling

Protects membranes, pumps, and ERDs

Ensures stable, long-term system performance

A correct startup procedure is one of the most cost-effective ways to protect a seawater RO system.

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